Van-Giang Trinh
Lifeware team, Inria Saclay
Bâtiment Alan Turing, Campus de l'École Polytechnique
1 rue Honoré d'Estienne d'Orves 91120 Palaiseau, France

 

Publications

Below is the complete list of my publications divided into each category. I use this color for theoretical work, this color for methodological work, and this color for mixing work.



In Preparation

  • Static analysis of logic programs via Boolean networks
    Van-Giang Trinh and Belaid Benhamou [arXiv]
  • mpbn: a simple tool for efficient edition and analysis of elementary properties of Boolean networks
    Van-Giang Trinh, Belaid Benhamou, and Loïc Paulevé [arXiv]

Submitted

  • Mapping the attractor landscape of Boolean networks
    Van-Giang Trinh, Kyu Hyong Park, Samuel Pastva, and Jordan C Rozum
    Oxford Bioinformatics, under review [bioRxiv]

Articles in Refereed Conferences

2025

  • Graphical analysis of abstract argumentation frameworks via Boolean networks
    Van-Giang Trinh, Belaid Benhamou, and Vincent Risch
    In ICAART 2025 (pages 745-756), regular paper [doi]
  • Detecting misleading information with LLMs and explainable ASP
    Quang-Anh Nguyen, Thu-Trang Pham, Thi-Hai-Yen Vuong, Van-Giang Trinh, and Ha-Thanh Nguyen
    In ICAART 2025 (pages 1327–1334), short paper [doi]

2024

  • Graphical conditions for the existence, unicity and number of regular models
    Van-Giang Trinh, Belaid Benhamou, Sylvain Soliman, and François Fages
    In ICLP 2024 (EPTCS, 416, pages 175-187) [doi]
  • Scalable enumeration of trap spaces in Boolean networks via answer set programming
    Van-Giang Trinh, Belaid Benhamou, Samuel Pastva, and Sylvain Soliman
    In AAAI 2024 (AAAI, pages 10714-10722), oral presentation [doi - supplement]

2023

  • Efficient enumeration of fixed points in complex Boolean networks using answer set programming
    Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
    In CP 2023 (LIPIcs, volume 280, pages 35:1–35:19) [doi]
  • Trap spaces of multi-valued networks: Definition, computation, and applications
    Van-Giang Trinh, Belaid Benhamou, Thomas Henzinger, and Samuel Pastva
    In ISMB/ECCB 2023 (OUP, 39(Supplement_1), i513–i522) [doi - supplement

2022

  • Computing attractors of large-scale asynchronous Boolean networks using minimal trap spaces
    Van-Giang Trinh, Kunihiko Hiraishi, and Belaid Benhamou
    In ACM-BCB 2022 (ACM, pages 1–10) [doi - HAL]
  • Minimal trap spaces of logical models are maximal siphons of their Petri net encoding
    Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
    In CMSB 2022 (Springer, pages 158–176) [doi - HAL]

2021

  • An improved method for finding attractors of large-scale asynchronous Boolean networks
    Van-Giang Trinh and Kunihiko Hiraishi
    In CIBCB 2021 (IEEE, pages 1–9) [doi]

2020

  • An efficient method for approximating attractors in large-scale asynchronous Boolean models
    Van-Giang Trinh and Kunihiko Hiraishi
    In BIBM 2020 (IEEE, pages 1–9, workshop paper) [doi]

2019

  • Algorithms for finding attractors of generalized asynchronous random Boolean networks
    Van-Giang Trinh and Kunihiko Hiraishi
    In ASCC 2019 (IEEE, pages 67–72) [url]

2017

  • Probabilistic modelling for congestion detection on wireless sensor networks
    Le Ngoc Kim Khanh, Van-Giang Trinh, Bui Hoai Thang, and Quan Thanh Tho
    In CoDIT 2017 (IEEE, pages 0190–0195) [doi]

2016

  • Fast-and-Fit: An intelligent auto-pricing system for airlines travel agencies
    Van-Giang Trinh, Nguyen Duc Khoan, Nguyen Duy Khuong, Vu Phu Thuc, and Quan Thanh Tho
    In SAI 2016 (Springer, pages 853–865) [doi]
  • Modeling and analysing Boolean networks by coloured Petri nets
    Van-Giang Trinh, Kunihiko Hiraishi, and Quan Thanh Tho
    In IEICE Proceedings Series 2016 (IEICE, 61(4447)) [doi]

2015

  • Reusing symbolic observation graph for efficient model checking
    Bao Trung Pham Duy, Van-Giang Trinh, Le Dinh Thuan, and Quan Thanh Tho
    In KSE 2015 (IEEE, pages 250–255) [doi]

Articles in Refereed Journals

2023

  • Trap spaces of Boolean networks are conflict-free siphons of their Petri net encoding
    Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
    Theoretical Computer Science (TCS), 2023 [doi - HAL]
  • Using answer set programming to deal with Boolean networks and attractor computation: Application to gene regulatory networks of cells
    Tarek Khaled, Belaid Benhamou, and Van-Giang Trinh
    Annals of Mathematics and Artificial Intelligence (AMAI), 2023 [doi - HAL]
  • Trap spaces of multi-valued networks: Definition, computation, and applications
    Van-Giang Trinh, Belaid Benhamou, Thomas Henzinger, and Samuel Pastva
    Bioinformatics, 2023 [doi - supplement]

2020

  • On attractor detection and optimal control of deterministic generalized asynchronous random Boolean networks
    Van-Giang Trinh, and Kunihiko Hiraishi
    IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2020 [doi - paper - supplement]
  • An FVS-based approach to attractor detection in asynchronous random Boolean networks
    Van-Giang Trinh, Tatsuya Akutsu, and Kunihiko Hiraishi
    IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2020 [doi - paper]
  • A study on attractors of generalized asynchronous random Boolean networks
    Van-Giang Trinh, and Kunihiko Hiraishi
    IEICE TRANSACTIONS on Fundamentals of Electronics, Communications and Computer Sciences, 2020 [doi]

2016

  • Modelling and congestion detection of wireless sensor networks: A concurrent-based approach using coloured Petri nets
    Van-Giang Trinh, Le Ngoc Kim Khanh, Bang Ngoc Bao Tam, Tram Loi Quan, Bui Hoai Thang, and Quan Thanh Tho
    International Journal of Applied Information Systems (IJAIS), 2016 [doi]

2014

  • Assisting students in finding bugs and their locations in programming solutions
    Pham Hong Long, Van-Giang Trinh, Dinh Hoang Mai, Mai Phuong Nam, Quan Thanh Tho, and Ngo Quang Hung
    International Journal of Quality Assurance in Engineering and Technology Education (IJQAETE), 2014 [doi]

Theses