Publications
Below is the complete list of my publications divided into each category. I use this color for theoretical work, this color for methodological work, and this color for mixing work.
- I have been collaborated with the following coauthors (in alphabetical order by last name): Tatsuya Akutsu, Belaid Benhamou, François Fages, Kunihiko Hiraishi, Thomas Henzinger, Ha-Thanh Nguyen, Kyu Hyong Park, Loïc Paulevé, Samuel Pastva, Thanh-Tho Quan, Jordan C Rozum, Vincent Risch, Sylvain Soliman, Thi-Hai-Yen Vuong.
- DBLP.
- Google Scholar.
In Preparation
- Static analysis of logic programs via Boolean networks
Van-Giang Trinh and Belaid Benhamou [arXiv] - mpbn: a simple tool for efficient edition and analysis of elementary properties of Boolean networks
Van-Giang Trinh, Belaid Benhamou, and Loïc Paulevé [arXiv]
Submitted
- Mapping the attractor landscape of Boolean networks
Van-Giang Trinh, Kyu Hyong Park, Samuel Pastva, and Jordan C Rozum
Oxford Bioinformatics, under review [bioRxiv]
Articles in Refereed Conferences
2025
- Graphical analysis of abstract argumentation frameworks via Boolean networks
Van-Giang Trinh, Belaid Benhamou, and Vincent Risch
In ICAART 2025 (pages 745-756), regular paper [doi] - Detecting misleading information with LLMs and explainable ASP
Quang-Anh Nguyen, Thu-Trang Pham, Thi-Hai-Yen Vuong, Van-Giang Trinh, and Ha-Thanh Nguyen
In ICAART 2025 (pages 1327–1334), short paper [doi]
2024
- Graphical conditions for the existence, unicity and number of regular models
Van-Giang Trinh, Belaid Benhamou, Sylvain Soliman, and François Fages
In ICLP 2024 (EPTCS, 416, pages 175-187) [doi] - Scalable enumeration of trap spaces in Boolean networks via answer set programming
Van-Giang Trinh, Belaid Benhamou, Samuel Pastva, and Sylvain Soliman
In AAAI 2024 (AAAI, pages 10714-10722), oral presentation [doi - supplement]
2023
- Efficient enumeration of fixed points in complex Boolean networks using answer set programming
Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
In CP 2023 (LIPIcs, volume 280, pages 35:1–35:19) [doi] - Trap spaces of multi-valued networks: Definition, computation, and applications
Van-Giang Trinh, Belaid Benhamou, Thomas Henzinger, and Samuel Pastva
In ISMB/ECCB 2023 (OUP, 39(Supplement_1), i513–i522) [doi - supplement]
2022
- Computing attractors of large-scale asynchronous Boolean networks using minimal trap spaces
Van-Giang Trinh, Kunihiko Hiraishi, and Belaid Benhamou
In ACM-BCB 2022 (ACM, pages 1–10) [doi - HAL] - Minimal trap spaces of logical models are maximal siphons of their Petri net encoding
Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
In CMSB 2022 (Springer, pages 158–176) [doi - HAL]
2021
- An improved method for finding attractors of large-scale asynchronous Boolean networks
Van-Giang Trinh and Kunihiko Hiraishi
In CIBCB 2021 (IEEE, pages 1–9) [doi]
2020
- An efficient method for approximating attractors in large-scale asynchronous Boolean models
Van-Giang Trinh and Kunihiko Hiraishi
In BIBM 2020 (IEEE, pages 1–9, workshop paper) [doi]
2019
- Algorithms for finding attractors of generalized asynchronous random Boolean networks
Van-Giang Trinh and Kunihiko Hiraishi
In ASCC 2019 (IEEE, pages 67–72) [url]
2017
- Probabilistic modelling for congestion detection on wireless sensor networks
Le Ngoc Kim Khanh, Van-Giang Trinh, Bui Hoai Thang, and Quan Thanh Tho
In CoDIT 2017 (IEEE, pages 0190–0195) [doi]
2016
- Fast-and-Fit: An intelligent auto-pricing system for airlines travel agencies
Van-Giang Trinh, Nguyen Duc Khoan, Nguyen Duy Khuong, Vu Phu Thuc, and Quan Thanh Tho
In SAI 2016 (Springer, pages 853–865) [doi] - Modeling and analysing Boolean networks by coloured Petri nets
Van-Giang Trinh, Kunihiko Hiraishi, and Quan Thanh Tho
In IEICE Proceedings Series 2016 (IEICE, 61(4447)) [doi]
2015
- Reusing symbolic observation graph for efficient model checking
Bao Trung Pham Duy, Van-Giang Trinh, Le Dinh Thuan, and Quan Thanh Tho
In KSE 2015 (IEEE, pages 250–255) [doi]
Articles in Refereed Journals
2023
- Trap spaces of Boolean networks are conflict-free siphons of their Petri net encoding
Van-Giang Trinh, Belaid Benhamou, and Sylvain Soliman
Theoretical Computer Science (TCS), 2023 [doi - HAL] - Using answer set programming to deal with Boolean networks and attractor computation: Application to gene regulatory networks of cells
Tarek Khaled, Belaid Benhamou, and Van-Giang Trinh
Annals of Mathematics and Artificial Intelligence (AMAI), 2023 [doi - HAL] - Trap spaces of multi-valued networks: Definition, computation, and applications
Van-Giang Trinh, Belaid Benhamou, Thomas Henzinger, and Samuel Pastva
Bioinformatics, 2023 [doi - supplement]
2020
- On attractor detection and optimal control of deterministic generalized asynchronous random Boolean networks
Van-Giang Trinh, and Kunihiko Hiraishi
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2020 [doi - paper - supplement] - An FVS-based approach to attractor detection in asynchronous random Boolean networks
Van-Giang Trinh, Tatsuya Akutsu, and Kunihiko Hiraishi
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), 2020 [doi - paper] - A study on attractors of generalized asynchronous random Boolean networks
Van-Giang Trinh, and Kunihiko Hiraishi
IEICE TRANSACTIONS on Fundamentals of Electronics, Communications and Computer Sciences, 2020 [doi]
2016
- Modelling and congestion detection of wireless sensor networks: A concurrent-based approach using coloured Petri nets
Van-Giang Trinh, Le Ngoc Kim Khanh, Bang Ngoc Bao Tam, Tram Loi Quan, Bui Hoai Thang, and Quan Thanh Tho
International Journal of Applied Information Systems (IJAIS), 2016 [doi]
2014
- Assisting students in finding bugs and their locations in programming solutions
Pham Hong Long, Van-Giang Trinh, Dinh Hoang Mai, Mai Phuong Nam, Quan Thanh Tho, and Ngo Quang Hung
International Journal of Quality Assurance in Engineering and Technology Education (IJQAETE), 2014 [doi]
Theses
- Van-Giang Trinh:
On Attractor Detection and Optimal Control of Boolean Networks
PhD thesis, Japan Advanced Institute of Science and Technology, 155 pages, 2021 [HDL - paper]